Dear Members, I am new to R/Bioconductor. I am trying to install AgiMicroRna package in bioconductor. I am following the article/manual provided by Pedro L?pez-Romero's article BMC Genomics 2011, 12:64. It says, first install the Bioconductor basic libraries. I am wondering what are these libraries and the commands to install it. Is source("http://bioconductor.org/biocLite.R") biocLite() the command to install basic libraries? OR source("http://bioconductor.org/biocLite.R") biocLite("limma") is this the command to install basic libraries? Thanks a lot. Please forgive if this post is redundant to what has been already posted. -- Karthik K.N

On 02/04/2012 11:14 PM, Karthik K N wrote: > Dear Members, > > I am new to R/Bioconductor. I am trying to install AgiMicroRna package > in bioconductor. I am following the article/manual provided by Pedro > L?pez-Romero's article BMC Genomics 2011, 12:64. > > It says, first install the Bioconductor basic libraries. I am > wondering what are these libraries and the commands to install it. Is > > source("http://bioconductor.org/biocLite.R") > biocLite() > > the command to install basic libraries? OR > > source("http://bioconductor.org/biocLite.R") > biocLite("limma") > > is this the command to install basic libraries? To install the AgiMicroRna package and all dependent software it needs, use source("http://bioconductor.org/biocLite.R") biocLite("AgiMicroRna") Martin > > Thanks a lot. Please forgive if this post is redundant to what has > been already posted. > -- Computational Biology Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: M1-B861 Telephone: 206 667-2793