Question: problems with oneChannelGUI
0
gravatar for Manuela Di Russo
7.5 years ago by
Manuela Di Russo70 wrote:
Dear all, I have installed oneChannelGUI (CPU: Intel(R) Xeon(R) E5607 @2.27GHz (2 processors); RAM: 32 GB; OS: Windows 7, 64 bit) following the installation procedure. I load oneChannelGUI package and at the beginning it seems to work but when I try to select the targets file a black window opens and I cannot go on. Any error message doesn't appear on the R interface. Sometimes the same type of problem occurs after loading the 3' IVT .CEL files, when I have to assign a name to the dataset. But even when I can assign the name to the dataset and click on the QC menu to select the intensity histogram tool, the same black window appears. I tried to use affylmGUI package but I encountered the same problem. Can anyone help me? I attach session info: > sessionInfo() R version 2.15.0 (2012-03-30) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=Italian_Italy.1252 LC_CTYPE=Italian_Italy.1252 [3] LC_MONETARY=Italian_Italy.1252 LC_NUMERIC=C [5] LC_TIME=Italian_Italy.1252 attached base packages: [1] tools tcltk stats graphics grDevices utils datasets [8] methods base other attached packages: [1] oneChannelGUI_1.22.0 Rsamtools_1.8.0 Biostrings_2.24.0 [4] GenomicRanges_1.8.0 IRanges_1.14.1 tkWidgets_1.34.0 [7] DynDoc_1.34.0 widgetTools_1.34.0 affylmGUI_1.30.0 [10] affyio_1.24.0 affy_1.34.0 limma_3.12.0 [13] Biobase_2.16.0 BiocGenerics_0.2.0 loaded via a namespace (and not attached): [1] BiocInstaller_1.4.0 bitops_1.0-4.1 preprocessCore_1.18.0 [4] stats4_2.15.0 zlibbioc_1.2.0 Thank you! Manuela ---------------------------------------------------------------------- ------ ---------- Manuela Di Russo, Ph.D. Student Department of Experimental Pathology, MBIE University of Pisa Pisa, Italy e-mail: <mailto:manuela.dirusso@for.unipi.it> manuela.dirusso@for.unipi.it tel: +39050993538 [[alternative HTML version deleted]]
ADD COMMENTlink written 7.5 years ago by Manuela Di Russo70
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 118 users visited in the last hour