Question: problems with oneChannelGUI
gravatar for Manuela Di Russo
7.5 years ago by
Manuela Di Russo70 wrote:
Dear all, I have installed oneChannelGUI (CPU: Intel(R) Xeon(R) E5607 @2.27GHz (2 processors); RAM: 32 GB; OS: Windows 7, 64 bit) following the installation procedure. I load oneChannelGUI package and at the beginning it seems to work but when I try to select the targets file a black window opens and I cannot go on. Any error message doesn't appear on the R interface. Sometimes the same type of problem occurs after loading the 3' IVT .CEL files, when I have to assign a name to the dataset. But even when I can assign the name to the dataset and click on the QC menu to select the intensity histogram tool, the same black window appears. I tried to use affylmGUI package but I encountered the same problem. Can anyone help me? I attach session info: > sessionInfo() R version 2.15.0 (2012-03-30) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=Italian_Italy.1252 LC_CTYPE=Italian_Italy.1252 [3] LC_MONETARY=Italian_Italy.1252 LC_NUMERIC=C [5] LC_TIME=Italian_Italy.1252 attached base packages: [1] tools tcltk stats graphics grDevices utils datasets [8] methods base other attached packages: [1] oneChannelGUI_1.22.0 Rsamtools_1.8.0 Biostrings_2.24.0 [4] GenomicRanges_1.8.0 IRanges_1.14.1 tkWidgets_1.34.0 [7] DynDoc_1.34.0 widgetTools_1.34.0 affylmGUI_1.30.0 [10] affyio_1.24.0 affy_1.34.0 limma_3.12.0 [13] Biobase_2.16.0 BiocGenerics_0.2.0 loaded via a namespace (and not attached): [1] BiocInstaller_1.4.0 bitops_1.0-4.1 preprocessCore_1.18.0 [4] stats4_2.15.0 zlibbioc_1.2.0 Thank you! Manuela ---------------------------------------------------------------------- ------ ---------- Manuela Di Russo, Ph.D. Student Department of Experimental Pathology, MBIE University of Pisa Pisa, Italy e-mail: <> tel: +39050993538 [[alternative HTML version deleted]]
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