Question: load a TranscriptDb object in another R session?
5.3 years ago by
Sang Chul Choi • 230
Sang Chul Choi • 230 wrote:
Hi, I made a TranscriptDb object, which worked fine when I use it in the same R session. I want to reuse it by saving the object and loading it in another R session. I got an error like following: > txdb <- makeTranscriptDb (transcripts, splicings, chrominfo=chrominfo) > save(txdb, file="a.rda") ... quit R and rerun R > load("a.rda") > feature.cds <- cds(txdb, columns="exon_name") Error in sqliteExecStatement(con, statement, bind.data) : RS-DBI driver: (expired SQLiteConnection) What do I have to reuse a TranscriptDb object in another R session? Thank you, SangChul
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