Entering edit mode
Joern Kamradt
▴
40
@joern-kamradt-748
Last seen 9.6 years ago
HI,
Iam using the marray version 1.4.9 and R 1.9. Each time I try to
import
raw-files I get an error message (see below).
Once I installed the old library marrayInput, the same command just
works
fine.
Any help is very welcome
Joern
> AZRAW <- read.marrayRaw(Resultfiles, path="~/AZstudy/AZResults",
name.Gf="SG_Mean", name.Rf="SR_Mean", name.W="rQuality",
gnames=Qiagen35KInfo,
targets=SlideInfo, notes="created 5/3/04, including 82 samples, incl.
SampleInfo
and GenInfo")
Error in file(con, "r") : unable to open connection
In addition: Warning message:
cannot open file `5912.xls'
> Resultfiles
[1] "HV3-9-02.Result" "HV3-9-03.Result" "HV3-9-04.Result"
"HV3-9-07.Result"
[5] "HV3-9-08.Result" "HV3-9-09.Result" "HV3-9-10.Result"
"HV3-9-11.Result"
[9] "HV3-9-12.Result" "HV3-9-13.Result" "HV3-9-14.Result"
"HV3-9-15.Result"
[13] "HV3-9-16.Result" "HV3-9-17.Result" "HV3-9-18.Result"
"HV3-9-19.Result"
[17] "HV3-9-21.Result" "HV3-9-22.Result" "HV3-9-23.Result"
"HV3-9-24.Result"
[21] "HV3-9-26.Result" "HV3-9-27.Result" "HV3-9-29.Result"
"HV3-9-30.Result"
[25] "HV3-9-31.Result" "HV3-9-32.Result" "HV3-9-33.Result"
"HV3-9-34.Result"
[29] "HV3-9-35.Result" "HV3-9-36.Result" "HV3-9-37.Result"
"HV3-9-38.Result"
[33] "HV3-9-39.Result" "HV3-9-41.Result" "HV3-9-42.Result"
"HV3-9-43.Result"
[37] "HV3-9-44.Result" "HV3-9-45.Result" "HV3-9-46.Result"
"HV3-9-49.Result"
[41] "HV3-9-51.Result" "HV3-9-52.Result" "HV3-9-53.Result"
"HV3-9-55.Result"
[45] "HV3-9-56.Result" "HV3-9-57.Result" "HV3-9-59.Result"
"HV3-9-60.Result"
[49] "HV3-9-61.Result" "HV3-9-62.Result" "HV3-9-63.Result"
"HV3-9-64.Result"
[53] "HV3-9-66.Result" "HV3-9-67.Result" "HV3-9-68.Result"
"HV3-9-69.Result"
[57] "HV3-9-70.Result" "HV3-9-71.Result" "HV3-9-72.Result"
"HV3-9-73.Result"
[61] "HV3-9-75.Result" "HV3-9-77.Result" "HV3-9-78.Result"
"HV3-9-79.Result"
[65] "HV3-9-80.Result" "HV3-9-81.Result" "HV3-9-82.Result"
"HV3-9-84.Result"
[69] "HV3-9-85.Result" "HV3-9-86.Result" "HV3-9-88.Result"
"HV3-9-89.Result"
[73] "HV3-9-90.Result" "HV3-9-91.Result" "HV3-9-92.Result"
"HV3-9-94.Result"
[77] "HV3-9-95.Result" "HV3-9-96.Result" "HV3-9-97.Result"
"HV3-9-98.Result"
[81] "HV3-9-99.Result" "HV3-9-100.Result"
> AZRAW <- read.marrayRaw(fnames=Resultfiles,
path="~/AZstudy/AZResults",
name.Gf="SG_Mean", name.Rf="SR_Mean", name.W="rQuality",
gnames=Qiagen35KInfo,
targets=SlideInfo, notes="created 5/3/04, including 82 samples, incl.
SampleInfo
and GenInfo")
Error in file(con, "r") : unable to open connection
In addition: Warning message:
cannot open file `5912.xls'
> AZRAW <- read.marrayRaw(fnames=Resultfiles,
path="/Users/joern/AZstudy/AZResults", name.Gf="SG_Mean",
name.Rf="SR_Mean",
name.W="rQuality", gnames=Qiagen35KInfo, targets=SlideInfo,
notes="created
5/3/04, including 82 samples, incl. SampleInfo and GenInfo")
Error in file(con, "r") : unable to open connection
In addition: Warning message:
cannot open file `5912.xls'
