Thank you for your help. Can you please tell me how do you exactly
source code of a package and the use this 'modified package'?
For example, I was wondering if it is possible to add some 'filter by
flags' option in limma so that I can filter out probes that do not
specified flag criteria from my Agilent single color microarray data
I am not sure if limma already has this function). Is this possible in
On Sat, Jun 16, 2012 at 4:06 PM, David Westergaard <email@example.com>
> Dear Karthik,
> If you go to the Bioconductor website www.bioconductor.org), and
> search for a package, (e.g. limma:
> the very bottom you have to option to download the source. If you
> just curious as to how the code looks, you can also view the source
> calling the function without any parameters. For instance, just
> running 'lmFit' would return the functions source code.
> Yes, it is also possible to edit the source code.
> 2012/6/16 Karthik K N <firstname.lastname@example.org>:
> > Hello members,
> > I am using AgiMicroRna and Limma packges for analyzing Agilent
> > data. I would like to know if it is possible to have access to the
> > codes of these packages so that I can better understand what is
> > the background when we call each functions.
> > Also, is it possible to edit the source code and run the package?
> > Thanks a lot in advance,
> > Regards,
> > --
> > Karthik
> > [[alternative HTML version deleted]]
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