pam implementation
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@wolfgang-huber-3550
Last seen 12 days ago
EMBL European Molecular Biology Laborat…
John not sure what's your measure of "best", but the pamr package on CRAN is the one from the authors. Best wishes Wolfgang Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande <john.lande77 at="" gmail.com=""> ha scritto: > dear all, > > what is the best implementation in R or Bioconductor of the PAM algorithm > probosed by Tibshirani et colleague? > > best reguards > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
pamr pamr • 1.2k views
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John Lande ▴ 280
@john-lande-2357
Last seen 9.6 years ago
thank you both for the answer. the point is that pamr lacks of a specific vignette as other bioc packages so I was wondering if it was discontinued somehow. is there around a tutorial that explains pipelines of analysis and functions? bests On Fri, Nov 2, 2012 at 7:42 PM, Wolfgang Huber <whuber@embl.de> wrote: > John > > not sure what's your measure of "best", but the pamr package on CRAN is > the one from the authors. > > Best wishes > Wolfgang > > Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande < > john.lande77@gmail.com> ha scritto: > > > dear all, > > > > what is the best implementation in R or Bioconductor of the PAM algorithm > > probosed by Tibshirani et colleague? > > > > best reguards > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor@r-project.org > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > > [[alternative HTML version deleted]]
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Hi John, On 05/11/12 09:42, John Lande wrote: > thank you both for the answer. > > the point is that pamr lacks of a specific vignette as other bioc packages > so I was wondering if it was discontinued somehow. > > is there around a tutorial that explains pipelines of analysis and > functions? see here http://www-stat.stanford.edu/~tibs/PAM/Rdist/doc/readme.html HTH, J. > > bests > > On Fri, Nov 2, 2012 at 7:42 PM, Wolfgang Huber <whuber at="" embl.de=""> wrote: > >> John >> >> not sure what's your measure of "best", but the pamr package on CRAN is >> the one from the authors. >> >> Best wishes >> Wolfgang >> >> Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande < >> john.lande77 at gmail.com> ha scritto: >> >>> dear all, >>> >>> what is the best implementation in R or Bioconductor of the PAM algorithm >>> probosed by Tibshirani et colleague? >>> >>> best reguards >>> >>> [[alternative HTML version deleted]] >>> >>> _______________________________________________ >>> Bioconductor mailing list >>> Bioconductor at r-project.org >>> https://stat.ethz.ch/mailman/listinfo/bioconductor >>> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >
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