About Rstudio via Amazon web services.
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Dan Tenenbaum ★ 8.2k
@dan-tenenbaum-4256
Last seen 9 weeks ago
United States
On Thu, Dec 27, 2012 at 7:04 AM, gregory voisin <voisingreg at="" yahoo.fr=""> wrote: > For your information, > 3 weeks ago, I subscribed to Amazon web services to use R studio and > bioconductor. > Here, I highlight a problem about the weird bill associated to the Amazon > web services: > > When you create a stack , a stockage volume is created and normally when you > delete a stack,the stockage volume is deleted too. > > But, in my case, the deletion of volume was problematic and after, 3 weeks > of usage, I had 40 stockage volume ( 40 gig by volume)associated to my > Amazon account and I have paid for that ( the first 40 gig is free). The > charge for that is not important ( 20 $CA for 3 weeks) but could be more > important if you don't check. > > It's not very clear if it's a lack of understanding of me or if it's a > technical problem associated to web service > > when you delete your instance, check your stockage volume: > 1.http://aws.amazon.com/fr/console/ > 2. connect to AWS console > 3. click on EC2 ( virtual servers in the cloud) > 4. In part " My services" : check EBS volume(normally :0) > Thanks for the report. I will add a note to our documentation about this so that others are aware that this can happen. Dan > Greg > Montreal > > > > > > ________________________________ > De : Dan Tenenbaum <dtenenba at="" fhcrc.org=""> > ? : gregory voisin <voisingreg at="" yahoo.fr=""> > Cc : "bioconductor at r-project.org" <bioconductor at="" r-project.org=""> > Envoy? le : Jeudi 27 d?cembre 2012 2h35 > Objet : Re: [BioC] Kegg Profile package problem > > On Wed, Dec 26, 2012 at 6:54 AM, gregory voisin <voisingreg at="" yahoo.fr=""> wrote: >> >> >> >> Hi, >> I use KeggProfile in my pipeline analysis and it's efficient, but I have >> problem with one pathway_ID. >> >> Exemple ( copy and paste): >> >> require(KEGGprofile) >> download_KEGGfile(pathway_id="04110",specis='hsa') >> >> #In this case , not problem >> >> download_KEGGfile(pathway_id="00910",specis='hsa') > > > I think perhaps there is no such pathway. Here's a list of all human > pathways: > http://rest.kegg.jp/list/pathway/hsa > > 04110 is included but 00910 is not. > > Dan > > >> >> #this pahway exits in KEGG, but the download is impossible >> #[1] "Downloading files: 1/1" >> #essai de l'URL >> 'http://www.genome.jp/kegg-bin/download?entry=hsa00910&format=kgml' >> #Content type 'text/plain' length unknown >> #URL ouverte >> #downloaded 1 bytes >> >> #essai de l'URL 'http://www.genome.jp/kegg/pathway/hsa/hsa00910.png' >> #Erreur dans download.file(paste("http://www.genome.jp/kegg/pathway/", >> specis, : >> # impossible d'ouvrir l'URL >> 'http://www.genome.jp/kegg/pathway/hsa/hsa00910.png' >> #De plus : Message d'avis : >> #In download.file(paste("http://www.genome.jp/kegg/pathway/", specis, : >> # ouverture impossible : le statut HTTP ?tait '404 Not Found' >> >> >> My solution : omit this pathway in my analysis: ponctual, fast but not >> very elegant and not professional !! >> >> If someone has a suggestion , comments or solution, let's go , >> >> Thanks >> >> Greg >> Montr?al >> >> [[alternative HTML version deleted]] >> >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor > >
GO KEGGprofile GO KEGGprofile • 514 views
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