Question: Pasilla data for "Counting with summarizeOverlaps/GenomicRanges"
5.0 years ago by
Darwin Sorento Dichmann • 50 wrote:
Greetings, I wish to follow the tutorial for summarizeOverlaps from GenomicRanges, but the pasilla.bam files ("treated1.bam", "untreated1.bam", "untreated2.bam") are not with in the package and the provided link for download is dead (http://www.embl.de/~reyes/Graveley/bam). Anybody know where I can get those data or have a copy? I also tried following the GEO accessions from the original publication, but all I found was GFFs and BEDs, no bams. Any help is greatly appreciated. Best, Darwin ________________________________ Darwin Sorento Dichmann, M.S., PhD University of California, Berkeley Harland Lab Molecular and Cell Biology 571 Life Sciences Addition Berkeley, CA 94720 Phone# (510) 643-7830 Fax# (510) 643-6791 E-mail: firstname.lastname@example.org Please send Fedex packages to: 163 Life Sciences Addition, attn: Harland lab room 571 [[alternative HTML version deleted]]
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