Visualize metabolic network using table with reactions
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@denis-kazakiewicz-5811
Last seen 9.6 years ago
Hello, I have metabolic reactions in data frame format. Key variables are WholeCellModelID (reaction ID), Enzyme (enzyme ID), Stoichiometry (reaction description in the format like [c]: COA + NAD + PYR <==> ACCOA + CO2 + NADH). So, it is easy to reshape this data if necessary. The question is What are basic steps and packages required to visualize these data as metabolic network? With best regards, Denis Kazakiewicz Bioinformatics Master Student Politechnika Wroclawska Poland
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