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Peter Langfelder ★ 2.6k@peter-langfelder-4469
Last seen 12 months ago
Hello, a user of my (CRAN) package WGCNA which depends on impute has a problem installing impute on his Mac OSX 10.8.3 under R 3.0.0. The problem seems to be loading the compiled libary impute.so. Can anyone please suggest a solution? Below is a transcript of his session. Thanks, Peter > biocLite("impute", lib = .libPaths()) BioC_mirror: http://bioconductor.org Using Bioconductor version 2.12 (BiocInstaller 1.10.0), R version 3.0.0. Installing package(s) 'impute' trying URL 'http://bioconductor.org/packages/2.12/bioc/bin/macosx/cont rib/3.0/impute_1.34.0.tgz' Content type 'application/x-gzip' length 652872 bytes (637 Kb) opened URL ================================================== downloaded 637 Kb The downloaded binary packages are in /var/folders/x_/wps51c0n0tx33tx406_xt9n80000gn/T//Rtmpd8CN5X/d ownloaded_packages > library(impute) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/impute /libs/impute.so': dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/librar y/impute/libs/impute.so, 6): Library not loaded: /usr/local/lib/libgfortran.2.dylib Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/library/impute/ libs/impute.so Reason: image not found Error: package or namespace load failed for ?impute?