Hi In this package, runTopologyGSAMulti function does not work. I get the message: Error: could not find function "runTopologyGSAMulti" I am able to get the runTopologyGSA function to work properly. I would be grateful if anyone can suggest a solution. Thank you Nasir

Hi Nasir, On Tue, Jun 4, 2013 at 3:17 PM, Mirza, Nasir <nasir.mirza at="" liverpool.ac.uk=""> wrote: > Hi > > In this package, runTopologyGSAMulti function does not work. I get the message: > Error: could not find function "runTopologyGSAMulti" > > I am able to get the runTopologyGSA function to work properly. > > I would be grateful if anyone can suggest a solution. > When I tried this I got the error: there is no package called 'topologyGSA' You can work around this with: source("http://bioconductor.org/biocLite.R") biocLite("topologyGSA") But really the package author needs to move topologyGSA from Suggests: to either Depends: or Imports: (in which case import(topologyGSA) needs to be added to NAMESPACE). If you're still having problems please email the output of the sessionInfo() command after loading the graphite package. Dan > Thank you > > Nasir > > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor