Rgraphviz::pieGlyph default values with warning

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Cristobal Fresno Rodríguez ▴ 370

@cristobal-fresno-rodriguez-3838

Last seen 8.0 years ago

Argentina/Cordoba/Universidad Católica …

Dear list, A strange behavior on pieGlyph function on default parameters has happened after updating. Although it produces the desire graphics, it is very annoying to have this warnings around. Best Kachelo > library("Rgraphviz") Loading required package: graph Loading required package: grid > plot(1:10, col="white") > pieGlyph(1:20, 5, 5) Warning messages: 1: In rep(border, length.out = nx) : 'x' is NULL so the result will be NULL 2: In rep(lty, length.out = nx) : 'x' is NULL so the result will be NULL 3: In rep(density, length.out = nx) : 'x' is NULL so the result will be NULL > sessionInfo() R version 3.0.0 (2013-04-03) Platform: x86_64-unknown-linux-gnu (64-bit) locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=C LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] grid stats graphics grDevices utils datasets methods [8] base other attached packages: [1] Rgraphviz_2.4.0 graph_1.38.2 loaded via a namespace (and not attached): [1] BiocGenerics_0.6.0 parallel_3.0.0 stats4_3.0.0 tools_3.0.0 [[alternative HTML version deleted]]

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ADD COMMENT • link updated 10.9 years ago by Kasper Daniel Hansen ★ 6.5k • written 10.9 years ago by Cristobal Fresno Rodríguez ▴ 370

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Kasper Daniel Hansen ★ 6.5k

@kasper-daniel-hansen-2979

Last seen 10 months ago

United States

Thanks for reporting this; I'll fix it in the next couple of days. Best, Kasper On Mon, Jun 10, 2013 at 3:56 PM, Cristobal Fresno Rodríguez < cristobalfresno@gmail.com> wrote: > Dear list, > > A strange behavior on pieGlyph function on default parameters has happened > after updating. Although it produces the desire graphics, it is very > annoying to have this warnings around. > > Best > > Kachelo > > > library("Rgraphviz") > Loading required package: graph > Loading required package: grid > > plot(1:10, col="white") > > pieGlyph(1:20, 5, 5) > Warning messages: > 1: In rep(border, length.out = nx) : > 'x' is NULL so the result will be NULL > 2: In rep(lty, length.out = nx) : 'x' is NULL so the result will be NULL > 3: In rep(density, length.out = nx) : > 'x' is NULL so the result will be NULL > > sessionInfo() > R version 3.0.0 (2013-04-03) > Platform: x86_64-unknown-linux-gnu (64-bit) > > locale: > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C > [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 > [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 > [7] LC_PAPER=C LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] grid stats graphics grDevices utils datasets methods > [8] base > > other attached packages: > [1] Rgraphviz_2.4.0 graph_1.38.2 > > loaded via a namespace (and not attached): > [1] BiocGenerics_0.6.0 parallel_3.0.0 stats4_3.0.0 tools_3.0.0 > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > [[alternative HTML version deleted]]

ADD COMMENT • link 10.9 years ago Kasper Daniel Hansen ★ 6.5k

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Hi Kasper, Please let me know when is ready Best, Kachelo 2013/6/11 Kasper Daniel Hansen <kasperdanielhansen@gmail.com> > Thanks for reporting this; I'll fix it in the next couple of days. > > Best, > Kasper > > > On Mon, Jun 10, 2013 at 3:56 PM, Cristobal Fresno Rodríguez < > cristobalfresno@gmail.com> wrote: > >> Dear list, >> >> A strange behavior on pieGlyph function on default parameters has happened >> after updating. Although it produces the desire graphics, it is very >> annoying to have this warnings around. >> >> Best >> >> Kachelo >> >> > library("Rgraphviz") >> Loading required package: graph >> Loading required package: grid >> > plot(1:10, col="white") >> > pieGlyph(1:20, 5, 5) >> Warning messages: >> 1: In rep(border, length.out = nx) : >> 'x' is NULL so the result will be NULL >> 2: In rep(lty, length.out = nx) : 'x' is NULL so the result will be NULL >> 3: In rep(density, length.out = nx) : >> 'x' is NULL so the result will be NULL >> > sessionInfo() >> R version 3.0.0 (2013-04-03) >> Platform: x86_64-unknown-linux-gnu (64-bit) >> >> locale: >> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >> [7] LC_PAPER=C LC_NAME=C >> [9] LC_ADDRESS=C LC_TELEPHONE=C >> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C >> >> attached base packages: >> [1] grid stats graphics grDevices utils datasets methods >> [8] base >> >> other attached packages: >> [1] Rgraphviz_2.4.0 graph_1.38.2 >> >> loaded via a namespace (and not attached): >> [1] BiocGenerics_0.6.0 parallel_3.0.0 stats4_3.0.0 tools_3.0.0 >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > [[alternative HTML version deleted]]

ADD REPLY • link 10.9 years ago Cristobal Fresno Rodríguez ▴ 370

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Fixed in 2.5.4. It will need some time to propagate to the build servers. Best, Kasper On Tue, Jun 11, 2013 at 4:34 PM, Cristobal Fresno Rodríguez < cristobalfresno@gmail.com> wrote: > Hi Kasper, > > Please let me know when is ready > > Best, > Kachelo > > > 2013/6/11 Kasper Daniel Hansen <kasperdanielhansen@gmail.com> > >> Thanks for reporting this; I'll fix it in the next couple of days. >> >> Best, >> Kasper >> >> >> On Mon, Jun 10, 2013 at 3:56 PM, Cristobal Fresno Rodríguez < >> cristobalfresno@gmail.com> wrote: >> >>> Dear list, >>> >>> A strange behavior on pieGlyph function on default parameters has >>> happened >>> after updating. Although it produces the desire graphics, it is very >>> annoying to have this warnings around. >>> >>> Best >>> >>> Kachelo >>> >>> > library("Rgraphviz") >>> Loading required package: graph >>> Loading required package: grid >>> > plot(1:10, col="white") >>> > pieGlyph(1:20, 5, 5) >>> Warning messages: >>> 1: In rep(border, length.out = nx) : >>> 'x' is NULL so the result will be NULL >>> 2: In rep(lty, length.out = nx) : 'x' is NULL so the result will be NULL >>> 3: In rep(density, length.out = nx) : >>> 'x' is NULL so the result will be NULL >>> > sessionInfo() >>> R version 3.0.0 (2013-04-03) >>> Platform: x86_64-unknown-linux-gnu (64-bit) >>> >>> locale: >>> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >>> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >>> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >>> [7] LC_PAPER=C LC_NAME=C >>> [9] LC_ADDRESS=C LC_TELEPHONE=C >>> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C >>> >>> attached base packages: >>> [1] grid stats graphics grDevices utils datasets methods >>> [8] base >>> >>> other attached packages: >>> [1] Rgraphviz_2.4.0 graph_1.38.2 >>> >>> loaded via a namespace (and not attached): >>> [1] BiocGenerics_0.6.0 parallel_3.0.0 stats4_3.0.0 tools_3.0.0 >>> >>> [[alternative HTML version deleted]] >>> >>> _______________________________________________ >>> Bioconductor mailing list >>> Bioconductor@r-project.org >>> https://stat.ethz.ch/mailman/listinfo/bioconductor >>> Search the archives: >>> http://news.gmane.org/gmane.science.biology.informatics.conductor >>> >> >> > [[alternative HTML version deleted]]

ADD REPLY • link 10.9 years ago Kasper Daniel Hansen ★ 6.5k

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