topgo GO mapping for non model organisms
0
0
Entering edit mode
km ▴ 100
@km-4342
Last seen 9.6 years ago
Hi all, I am planning to use topgo for GO enrichment of RNA-seq data from tophat/cufflinks pipeline. I have a non-model organism and hence donot have GO mappings in bioconductor annotation package. How do I obtain the GO mappings for my organism genes (universe) and how do I plug it into the topgo analysis pipeline ? could someone point at any example of how to ? Thanks! Regards, Kr [[alternative HTML version deleted]]
Annotation GO Organism topGO Annotation GO Organism topGO • 2.2k views
ADD COMMENT

Login before adding your answer.

Traffic: 499 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6