Question: Human Gene 1.1 st array
gravatar for Jerry Cholo
6.2 years ago by
Jerry Cholo190
Jerry Cholo190 wrote:
Hello, To analyze Human Gene 1.1 st array, I used these CDF files, which are: HuGene-1_1-st-v1_ascii.CDF and (ii) HuGene-1_1-st-v1,byTranscript-fsetid, (from **<http: nmg-r.bioinf="""" nugo_r.html=""> ). Unfortunately, I am getting the errors (see bellow) that stopped me to move forward in my work. Please let me know if there is another website to download this CDF file. FYI, I am using MATLAB "affygcrma" function. Warning: The ChipType (HuGene-1_1-st-v1) of CEL file sample01_HuGene1.1ST_C04_2.CEL does not match the ChipType (HuGene-1_1-st-v1_ascii) of library file HuGene-1_1-st-v1_ascii.CDF. > In celintensityread at 255 In affygcrma at 140 Furthermore, when I used "limma" (R-package) to analyze this array, I got another set of errors. Please provide me your comments and solutions that I could get some output results from this array. Thanks, Jerry [[alternative HTML version deleted]]
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