Question: Human Gene 1.1 st array
0
gravatar for Jerry Cholo
6.2 years ago by
Jerry Cholo190
Jerry Cholo190 wrote:
Hello, To analyze Human Gene 1.1 st array, I used these CDF files, which are: HuGene-1_1-st-v1_ascii.CDF and (ii) HuGene-1_1-st-v1,byTranscript-fsetid,pd.hugene.1.1.st.v1.cdf (from *http://nmg-r.bioinformatics.nl/NuGO_R.html*<http: nmg-r.bioinf="" ormatics.nl="" nugo_r.html=""> ). Unfortunately, I am getting the errors (see bellow) that stopped me to move forward in my work. Please let me know if there is another website to download this CDF file. FYI, I am using MATLAB "affygcrma" function. Warning: The ChipType (HuGene-1_1-st-v1) of CEL file sample01_HuGene1.1ST_C04_2.CEL does not match the ChipType (HuGene-1_1-st-v1_ascii) of library file HuGene-1_1-st-v1_ascii.CDF. > In celintensityread at 255 In affygcrma at 140 Furthermore, when I used "limma" (R-package) to analyze this array, I got another set of errors. Please provide me your comments and solutions that I could get some output results from this array. Thanks, Jerry [[alternative HTML version deleted]]
cdf • 754 views
ADD COMMENTlink written 6.2 years ago by Jerry Cholo190
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 449 users visited in the last hour