platform design info for primeview arrays for oligo package
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Anthony Bosco ▴ 500
@anthony-bosco-517
Last seen 9.6 years ago
Dear BioC, Is there a platform design info package available for Affymetrix PrimeView arrays? Best regards, Anthony [[alternative HTML version deleted]]
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@james-w-macdonald-5106
Last seen 21 minutes ago
United States
Hi Anthony, No, but there is a conventional cdf package for use with the affy package. You can also easily build one for yourself using pdInfoBuilder. Best, Jim On 2/17/2014 10:02 PM, Anthony Bosco wrote: > Dear BioC, > > > > Is there a platform design info package available for Affymetrix > PrimeView arrays? > > > > Best regards, > > > > Anthony > > > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099
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Thanks James, Best regards, Anthony -----Original Message----- From: James W. MacDonald [mailto:jmacdon@uw.edu] Sent: Tuesday, 18 February 2014 10:56 PM To: Anthony Bosco Cc: bioconductor at r-project.org Subject: Re: [BioC] platform design info for primeview arrays for oligo package Hi Anthony, No, but there is a conventional cdf package for use with the affy package. You can also easily build one for yourself using pdInfoBuilder. Best, Jim On 2/17/2014 10:02 PM, Anthony Bosco wrote: > Dear BioC, > > > > Is there a platform design info package available for Affymetrix > PrimeView arrays? > > > > Best regards, > > > > Anthony > > > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099 -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean.
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