CAMERA on Mac OS X 10.9 (Mavericks)

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I am trying to work with MAIT package on MacOS X10.9 Mavericks. since CAMERA package doesn't have download for Mac OS X 10.9 (Mavericks) therefore I am unable to work with it. Have contacted CAMERA maintainer but didn't get any response. Any help will be very valuable. Thanks -- output of sessionInfo(): Installing package into ???/Users/anahid/Library/R/3.1/library??? (as ???lib??? is unspecified) ERROR: dependency ???CAMERA??? is not available for package ???MAIT??? * removing ???/Users/anahid/Library/R/3.1/library/MAIT??? Warning message: In install.packages("/Users/anahid/Desktop/MAIT_0.16.tar.gz", type = "source", : installation of package ???/Users/anahid/Desktop/MAIT_0.16.tar.gz??? had non-zero exit status -- Sent via the guest posting facility at bioconductor.org.

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ADD COMMENT • link updated 9.7 years ago by Steve Lianoglou ★ 13k • written 9.7 years ago by Guest User ★ 13k

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Steve Lianoglou ★ 13k

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Hi, On Tue, Aug 5, 2014 at 5:21 AM, amsha nahid [guest] <guest at="" bioconductor.org=""> wrote: > I am trying to work with MAIT package on MacOS X10.9 Mavericks. since CAMERA package doesn't have download for Mac OS X 10.9 (Mavericks) therefore I am unable to work with it. > > Have contacted CAMERA maintainer but didn't get any response. > > Any help will be very valuable. As far as I understand it: you can (and maybe should) run the snow leopard version of R (and, thus all of the snowleopard-compiled packages) under Mavericks. More info can be found here: https://stat.ethz.ch/pipermail/r-sig-mac/2014-April/010835.html So ... I'd probably just install the snow leopard version of R for the time being. HTH, -steve -- Steve Lianoglou Computational Biologist Genentech

ADD COMMENT • link 9.7 years ago Steve Lianoglou ★ 13k

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Hi Amsha, ----- Original Message ----- > From: "Steve Lianoglou" <lianoglou.steve at="" gene.com=""> > To: "amsha nahid [guest]" <guest at="" bioconductor.org=""> > Cc: "amsha nahid" <amsha.nahid at="" gmail.com="">, "bioconductor at r-project.org list" <bioconductor at="" r-project.org="">, "CAMERA > Maintainer" <ckuhl at="" ipb-halle.de=""> > Sent: Tuesday, August 5, 2014 9:32:12 AM > Subject: Re: [BioC] CAMERA on Mac OS X 10.9 (Mavericks) > > Hi, > > On Tue, Aug 5, 2014 at 5:21 AM, amsha nahid [guest] > <guest at="" bioconductor.org=""> wrote: > > I am trying to work with MAIT package on MacOS X10.9 Mavericks. > > since CAMERA package doesn't have download for Mac OS X 10.9 > > (Mavericks) therefore I am unable to work with it. > > > > Have contacted CAMERA maintainer but didn't get any response. > > > > Any help will be very valuable. > > As far as I understand it: you can (and maybe should) run the snow > leopard version of R (and, thus all of the snowleopard-compiled > packages) under Mavericks. > > More info can be found here: > > https://stat.ethz.ch/pipermail/r-sig-mac/2014-April/010835.html > > So ... I'd probably just install the snow leopard version of R for > the > time being. It looks like the release version of CAMERA built on Mavericks on today's build report. It will be available via biocLite("CAMERA") within a couple of hours. Dan > > HTH, > -steve > > -- > Steve Lianoglou > Computational Biologist > Genentech > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor >

ADD REPLY • link 9.7 years ago Dan Tenenbaum ★ 8.2k

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----- Original Message ----- > From: "Dan Tenenbaum" <dtenenba at="" fhcrc.org=""> > To: "Steve Lianoglou" <lianoglou.steve at="" gene.com=""> > Cc: "amsha nahid" <amsha.nahid at="" gmail.com="">, "bioconductor at r-project.org list" <bioconductor at="" r-project.org="">, "CAMERA > Maintainer" <ckuhl at="" ipb-halle.de="">, "amsha nahid [guest]" <guest at="" bioconductor.org=""> > Sent: Tuesday, August 5, 2014 11:53:12 AM > Subject: Re: [BioC] CAMERA on Mac OS X 10.9 (Mavericks) > > Hi Amsha, > > ----- Original Message ----- > > From: "Steve Lianoglou" <lianoglou.steve at="" gene.com=""> > > To: "amsha nahid [guest]" <guest at="" bioconductor.org=""> > > Cc: "amsha nahid" <amsha.nahid at="" gmail.com="">, > > "bioconductor at r-project.org list" <bioconductor at="" r-project.org="">, > > "CAMERA > > Maintainer" <ckuhl at="" ipb-halle.de=""> > > Sent: Tuesday, August 5, 2014 9:32:12 AM > > Subject: Re: [BioC] CAMERA on Mac OS X 10.9 (Mavericks) > > > > Hi, > > > > On Tue, Aug 5, 2014 at 5:21 AM, amsha nahid [guest] > > <guest at="" bioconductor.org=""> wrote: > > > I am trying to work with MAIT package on MacOS X10.9 Mavericks. > > > since CAMERA package doesn't have download for Mac OS X 10.9 > > > (Mavericks) therefore I am unable to work with it. > > > > > > Have contacted CAMERA maintainer but didn't get any response. > > > > > > Any help will be very valuable. > > > > As far as I understand it: you can (and maybe should) run the snow > > leopard version of R (and, thus all of the snowleopard-compiled > > packages) under Mavericks. > > > > More info can be found here: > > > > https://stat.ethz.ch/pipermail/r-sig-mac/2014-April/010835.html > > > > So ... I'd probably just install the snow leopard version of R for > > the > > time being. > > It looks like the release version of CAMERA built on Mavericks on > today's build report. It will be available via biocLite("CAMERA") > within a couple of hours. > I'm sorry, I mis-spoke. I was reading the build report wrong (got confused because a platform was missing). We do not yet have a Mavericks version of this package but I'm working on it and trying to reach the maintainer. Dan > Dan > > > > > > HTH, > > -steve > > > > -- > > Steve Lianoglou > > Computational Biologist > > Genentech > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor at r-project.org > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: > > http://news.gmane.org/gmane.science.biology.informatics.conductor > > >

ADD REPLY • link 9.7 years ago Dan Tenenbaum ★ 8.2k

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