CRISPRseek orgAnn argument
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Julie Zhu ★ 4.3k
@julie-zhu-3596
Last seen 4 months ago
United States

David,

The release version does not have argument orgAnn, which is for annotating gRNAs in Exon with gene id.

Could you please post the question in  https://support.bioconductor.org, detailed below? Thanks !

Best,

Julie

Begin forwarded message:
 

From: <bioconductor-owner@r-project.org>
Date: September 17, 2014 at 10:31:14 PM EDT
To: <julie.zhu@umassmed.edu>
Subject: Re: CRISPseek - question about orgAnn

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> On Sep 17, 2014, at 10:07 PM, "Nowak, Dawid" <dnowak@cshl.edu> wrote:

> Hi Julie,

> I am really enjoying using CRISPseek! Recently, I encountered this problem with “orgAnn" 

> Error in offTargetAnalysis(inputFilePath, REpatternFile = REpatternFile,  : 

>  unused argument (orgAnn = org.Hs.egSYMBOL)

> Everything seems to work fine I am just not sure what I could miss without using “orgAnn”

> Best,

> Dawid

crisprseek • 1.1k views
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