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Question: Blast K and Lambda
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gravatar for haifengc
3.1 years ago by
haifengc0
haifengc0 wrote:

Hello, I have a question about Blast parameter. 

In Blast search results, for different queries the K and Lambda value is different for Ungapped search. For gapped search , they are the same.

However, for other software, for example, UBlast, and RAPsearch2, they set the K and Lambda as a fixed parameter?

Do this matter the results?

Thanks in advance.

ADD COMMENTlink written 3.1 years ago by haifengc0

This is not a Bioconductor question. You may get better luck at http://www.biostars.org.

ADD REPLYlink written 3.1 years ago by Diego Diez700
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