heatmap.2 like plot in ggplot
1
0
Entering edit mode
Georg Otto ▴ 120
@georg-otto-6333
Last seen 2.8 years ago
United Kingdom

Dear all, I am wondering if anybody has implemented a heatmap.2 like functionality (from package gplots) in ggplots2?

Best wishes,

 

Georg

plot • 2.0k views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 21 hours ago
United States

Neither gplots nor ggplot2 are Bioconductor packages, so this isn't the place to ask this question. In addition, a simple google search of 'ggplot2 heatmap' brings up tons of hits, so I would refer you there.
 

ADD COMMENT
0
Entering edit mode

I take your point that gplots is not a bioconductor package. I am actually looking for something that extends the simple heatmap plot, but allows to include cluster trees, as heatmap.2 does, but in ggplot2.

ADD REPLY
0
Entering edit mode

I take your point that gplots is not a bioconductor package. I am actually looking for something that extends the simple heatmap plot, but allows to include cluster trees, as heatmap.2 does, but in ggplot2.

ADD REPLY

Login before adding your answer.

Traffic: 377 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6