Question: ConnectionMap rankMatrix value
0
gravatar for ylc35
5.1 years ago by
ylc3510
United States
ylc3510 wrote:

One simple question. In your ConnectivityMap package, dataset "rankMatrix", what are the numbers for each probe_ID mean?

Thanks,

 

Y.L.

connectionmap • 519 views
ADD COMMENTlink modified 5.1 years ago by pshannon90 • written 5.1 years ago by ylc3510

I don't see a ConnectivityMap package in Bioconductor. Is that the correct package name? If this isn't a Bioconductor package, then you need to contact the author/maintainer, rather than asking here.

ADD REPLYlink written 5.1 years ago by James W. MacDonald52k
Answer: ConnectionMap rankMatrix value
0
gravatar for pshannon
5.1 years ago by
pshannon90
United States
pshannon90 wrote:

Hi Y.L,

The cmap data is from the Broad; we offer it with their permission.   I believe you can find the answer to your question in their help docs, which can be found here:

  http://www.broadinstitute.org/cmap/help_topics_linkified.jsp

Let us know if that provides what you are looking for.   I can dig deeper if you find it inadequate.

 - Paul

ADD COMMENTlink written 5.1 years ago by pshannon90
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