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Dear all,
I was trying to install lumi package in my computer, however I couldn't do that because of error messages during the installation process.
Messages were:
> biocLite("lumi") BioC_mirror: http://bioconductor.org Using Bioconductor version 3.0 (BiocInstaller 1.16.0), R version 3.1.1. Installing package(s) 'lumi' trying URL 'http://bioconductor.org/packages/3.0/bioc/bin/windows/contrib/3.1/GenomicAlignments_1.2.0.zip' Error in download.file(url, destfile, method, mode = "wb", ...) : cannot open URL 'http://bioconductor.org/packages/3.0/bioc/bin/windows/contrib/3.1/GenomicAlignments_1.2.0.zip' In addition: Warning messages: 1: In download.file(url, destfile, method, mode = "wb", ...) : downloaded length 1336731 != reported length 1337048 2: In download.file(url, destfile, method, mode = "wb", ...) : cannot open: HTTP status was '404 Not Found' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package ‘GenomicAlignments’ failedtrying URL 'http://bioconductor.org/packages/3.0/bioc/bin/windows/contrib/3.1/lumi_2.18.0.zip' Warning: unable to move temporary installation ‘\\ad.ucl.ac.uk\slms\Home3\rmhvlrr\Documents\R\win-library\3.1\file1ef81e8f4518\brew’ to ‘\\ad.ucl.ac.uk\slms\Home3\rmhvlrr\Documents\R\win-library\3.1\brew’ Warning: unable to move temporary installation ‘\\ad.ucl.ac.uk\slms\Home3\rmhvlrr\Documents\R\win-library\3.1\file1ef84db47278\rngtools’ to ‘\\ad.ucl.ac.uk\slms\Home3\rmhvlrr\Documents\R\win-library\3.1\rngtools’ Error in read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) : cannot open the connection In addition: Warning messages: 1: In unzip(zipname, exdir = dest) : error 1 in extracting from zip file 2: In read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) : cannot open compressed file 'multtest/DESCRIPTION', probable reason 'No such file or directory'
Is there anyone that could me help on that?