Question: affy and limma
gravatar for Gordon Smyth
15.2 years ago by
Gordon Smyth39k
Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
Gordon Smyth39k wrote:
affylmGUI already does exactly this, i.e., it gives you an interface to the normalization functions of the affy package. There is no need to use affy separately to affylmGUI, unless you needs are very specialized. Gordon >Thu Sep 30 18:02:42 CEST 2004 >Hi, >I'd like to be able to use the normalization functions of the affy package >and the graphical/statistical functions of the affylmGUI package. Ideally >it would be good to convert the affy classes into a .lma file for direct >input into afflmGUI. Does anyone know if this is possible?? Alternatively >is it possible to convert the separate components of the affy pacakge (e.g >affybatch and exprset) into classes that can be read by affylmGUI? > >Thanks for any help! > >Gareth
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