I was wondering if anyone has a package for calling genotypes with CRLMM on the Axiom® Genome-Wide Population-Optimized arrays. The only one I can find available are for SNP arrays 5.0 and 6.0.
for the moment, the crlmm package does not handle the Axiom chips. This is a priority for the project and I'll contact the group as soon as it is implemented.
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