Entering edit mode
Georg Otto
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510
@georg-otto-956
Last seen 10.3 years ago
Dear bioconductors,
i have a problem that presumably concerns my cdfenv installation.
I use the zebrafish affymetrix gene chip, and I tried simpleaffy to
get
some quality control measures. Getting the expression measures with
mas5 seems to work fine, but
> qc<-qc(x, x.mas5)
Gives me an error message:
Error in qc.affy(unnormalised, ...) : I'm sorry I do not know about
chip type: zebrafishcdf
I installed the zebrafishcdf from the bioconductor website but i still
get the same error. Then I made the cdf environment myself using the
CDF file from Affymetrix and makecdfenv. Unfortunately there is still
the same error.
Is there something that I missed?
Best regards,
Georg