Question: Extracting information from .ab1 files
0
4.4 years ago by
anuragm0
India
anuragm0 wrote:

I wish to extract information from a .ab1 file. Specifically, the amplitude of primary and secondary base call peaks - P1AM.1 and P2AM.1

library(sangerseqR)
x@data$P1AM.1 gives me output NULL. Any help regarding what I am doing wrong ? ab1 sangerseqr • 733 views ADD COMMENTlink modified 4.4 years ago by aaron.l.statham10 • written 4.4 years ago by anuragm0 Answer: Extracting information from .ab1 files 1 4.4 years ago by Australia aaron.l.statham10 wrote: Works for me - perhaps you have an odd ab1 file? library(sangerseqR) x=read.abif("1774_H05_LPR17621_IgE_PC_A11_015.ab1") str(x@data$P1AM.1)

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