genefilter and Rv2.0.0
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@rkakkaruchicagoedu-594
Last seen 9.6 years ago
Attempting to load genefilter into Bioconductor on Rv2.0.0 (Windows). Rv2.0.0 seems to require update to developer releases of most Bioconductor packages as they would not load otherwise (used getBioC("all", develOK=TRUE) for this). However, genefilter seems to be at release 1.4.0, which will not load into Bioconductor in Rv2.0.0. Genefilter developer version 1.4.5 is available as source file and not win32. Any suggestions as to how to work around this? Thanks for your help.
genefilter genefilter • 731 views
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rgentleman ★ 5.5k
@rgentleman-7725
Last seen 9.0 years ago
United States
On Mon, Oct 18, 2004 at 02:54:25PM -0500, Rahul Kakkar wrote: > Attempting to load genefilter into Bioconductor on Rv2.0.0 (Windows). > Rv2.0.0 seems to require update to developer releases of most > Bioconductor packages as they would not load otherwise (used Yep, we did try and say that on the web site. > getBioC("all", develOK=TRUE) for this). > However, genefilter seems to be at release 1.4.0, which will not load > into Bioconductor in Rv2.0.0. Genefilter developer version 1.4.5 is > available as source file and not win32. Any suggestions as to how to > work around this? It failed to build last night - we're trying to track down why, but there should be a version up soon. Alternatively, you can follow the instructions on the R site for setting up your windows machine for compiling packages and build it from source locally. Robert > Thanks for your help. > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- +--------------------------------------------------------------------- ------+ | Robert Gentleman phone : (617) 632-5250 | | Associate Professor fax: (617) 632-2444 | | Department of Biostatistics office: M1B20 | | Harvard School of Public Health email: rgentlem@jimmy.harvard.edu | +--------------------------------------------------------------------- ------+
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