I want to use ChIPpeakAnno package, but I got an error message:package 'GO.db' could not be loaded. Then I tried to load the GO.db, and I received a loadNamespace error when I tried to attach the package via library(GO.db ).
Any help would be really appreciated!
> library(ChIPpeakAnno)
Loading required package: grid
Loading required package: VennDiagram
Loading required package: biomaRt
Loading required package: multtest
Loading required package: IRanges
Loading required package: Biostrings
Loading required package: XVector
Loading required package: BSgenome
Loading required package: GenomicRanges
Attaching package: ‘BSgenome’
The following object is masked from ‘package:AnnotationDbi’:
species
Loading required package: BSgenome.Ecoli.NCBI.20080805
Loading required package: GO.db
Error : .onLoad failed in loadNamespace() for 'GO.db', details:
call: match.arg(synchronous, c("off", "normal", "full"))
error: 'arg' must be NULL or a character vector
Error: package ‘GO.db’ could not be loaded
> library(GO.db)
Error : .onLoad failed in loadNamespace() for 'GO.db', details:
call: match.arg(synchronous, c("off", "normal", "full"))
error: 'arg' must be NULL or a character vector
Error: package or namespace load failed for ‘GO.db’
> traceback()
2: stop(gettextf("package or namespace load failed for %s", sQuote(package)),
call. = FALSE, domain = NA)
1: library(GO.db)
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)
locale:
[1] en_AU.UTF-8/en_AU.UTF-8/en_AU.UTF-8/C/en_AU.UTF-8/en_AU.UTF-8
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] BiocInstaller_1.12.1 RSQLite_1.0.0 DBI_0.3.1 AnnotationDbi_1.24.0 Biobase_2.22.0 BiocGenerics_0.8.0
loaded via a namespace (and not attached):
[1] IRanges_1.20.7 stats4_3.0.2 tools_3.0.2
