Limma on a merged ESET
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Vani ▴ 20
@vani-8145
Last seen 5.9 years ago
United States

Is it possible to run limma on an ESET containing the data of 4 normalized datasets that have been merged? If yes please advise. I am trying to use the two functions: lmFit and eBayes on the ESET. 

limma microarray eset • 983 views
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It's possible to run limma on an ExpressionSet containing any sort of numeric data, regardless of their provenance. A better question would be 'Is it advisable to do so?' which is a very different question, and has little to do with limma.

You could perhaps say more about what you are trying to accomplish, but it might be faster to just read this.

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