Question: how to load edgeR each time I start R?
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lplough • 0 wrote:
This is an easy question but I can't find good documentation.
After installing or "sourcing" biocLite and installed relevant packages (edgeR, etc) I can run my analyses. But after closing the R session, and then restarting it, I have to resource BiocLite and then load all packages again. Seems like I wouldnt want to do this each time. Is there an appropriate way to have my packages saved from previous installations, so i can just load (e.g. > library(xxx) ) all neccessary BiocLite packages ?
Thanks
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modified 4.4 years ago
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James W. MacDonald ♦ 52k
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4.4 years ago by
lplough • 0


Sorry, I didn't explain myself well. I haven't been using Bioconductor for long, so thought I had missed something in how packages were loaded/retained/accessed. Anyway I figured out my brainfart. I was switching between 2 servers and R versions and had not installed BiocLite on both. So I thought I had installed the edgeR package on my local server, but had not so obv. it wouldn't load! Thanks for the reply and sorry for the question.