I once loaded the AnnotationHub library and called the object through
hub = AnnotationHub()
But then I got in a rush and I forced the code to stop running and shut down R. Ever since, when I run the same code, I get the following error:
library(AnnotationHub) > hub = AnnotationHub() Error: 'AnnotationHub' database corrupt; remove it and try again database: ‘/Users/koenvandenberge/.AnnotationHub/annotationhub.sqlite3’ reason: missing tables
I have tried removing the annotionhub sqlite database through Terminal, removing AnnotationHub package and reinstalling it, but it gives me the same error message.
Any ideas on how to fix this?