Question: NGScopy package throwing error during installation
0
gravatar for JstRoRR
4.5 years ago by
JstRoRR0
UK
JstRoRR0 wrote:

I am trying to install NGScopy bioconductor package. While installing its throwing following errors. Any ideas how can I resolve this issue?

source("http://bioconductor.org/biocLite.R")
biocLite("NGScopy")

 

 

Error : object 'multiple.mean.norm' is not exported by 'namespace:changepoint'

ERROR: lazy loading failed for package 'NGScopy'

 

The sessionInfo is as follows:

R version 3.2.0 (2015-04-16)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: CentOS release 6.4 (Final)

locale:
 [1] LC_CTYPE=en_GB.iso885915       LC_NUMERIC=C
 [3] LC_TIME=en_GB.iso885915        LC_COLLATE=en_GB.iso885915
 [5] LC_MONETARY=en_GB.iso885915    LC_MESSAGES=en_GB.iso885915
 [7] LC_PAPER=en_GB.iso885915       LC_NAME=C
 [9] LC_ADDRESS=C                   LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_GB.iso885915 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] BiocInstaller_1.18.4

loaded via a namespace (and not attached):
 [1] MASS_7.3-43      colorspace_1.2-6 scales_0.2.5     magrittr_1.5
 [5] plyr_1.8.3       tools_3.2.0      gtable_0.1.2     reshape2_1.4.1
 [9] Rcpp_0.12.0      ggplot2_1.0.1    stringi_0.5-5    grid_3.2.0
[13] stringr_1.0.0    digest_0.6.8     proto_0.3-10     munsell_0.4.2

 

Thanks

installation cnv ngscopy • 609 views
ADD COMMENTlink written 4.5 years ago by JstRoRR0

The Maintainer of NGScopy has been notified about this issue. The problem is NGScopy depends on a CRAN package which has changed the functions that it exports. The NGScopy maintainer needs to fix this issue before you will be able to use the package.

 

ADD REPLYlink written 4.4 years ago by Dan Tenenbaum8.2k
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