I have peak file for four different condition without replicate. I converted the text file to Bed file by taking column 2,3,4,8 and 5 which is chr, start, end, score and strand respectively and also removed first 40 line having "#' in the begining. and then created samplesheet "sample.csv" having column Id, tissue, condition, bamreads, bamconrtol, peak, peakcaller.
steps I followed
## When i am running below command I am getting error "Error in pv$peaks[[i]] : subscript out of bounds"
COR = dba.count(COR, minOverlap=3)
1.What is this error?
2.Why I am getting this error ?
3.What is the solution of this?
Thanks in advance.
Gyan Prakash Mishra