problem on genomicFeatures installing
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tlguo • 0
@tlguo-8612
Last seen 8.7 years ago

Dear all ,

i just want to install cummerRbund . during the course of installing , i met a question

 

 

biocLite("GenomicFeatures")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 2.13 (BiocInstaller 1.12.1), R version 3.2.1.
Temporarily using Bioconductor version 2.13
Installing package(s) 'GenomicFeatures'
trying URL 'http://bioconductor.org/packages/2.13/bioc/src/contrib/GenomicFeatures_1.14.5.tar.gz'
Content type 'application/x-gzip' length 814511 bytes (795 KB)
==================================================
downloaded 795 KB

* installing *source* package ‘GenomicFeatures’ ...
** R
** inst
** preparing package for lazy loading
Error : object ‘sqliteQuickSQL’ is not exported by 'namespace:RSQLite'
ERROR: lazy loading failed for package ‘GenomicFeatures’
* removing ‘/usr/local/lib/R/site-library/GenomicFeatures’

 

how can i solve this problem?thx.

 

 

 

Error : object ‘sqliteQuickSQL’ is not exported by 'namespace:RSQLite' • 1.3k views
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Entering edit mode
@james-w-macdonald-5106
Last seen 1 minute ago
United States

It looks like you have a mismatched Bioconductor installation, as you shouldn't be using Bioc 2.13 with R 3.2.1. You should update by doing

library(BiocInstaller)

biocLite()
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