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Question: How can get the GO and KEGG miRNA microarray Agilent?
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gravatar for santi.cabellos
2.2 years ago by
United Kingdom
santi.cabellos0 wrote:

Hello, 

I'm interested in getting the GO and KEGG miRNA from Agilent microarray.

I analysed the microarrays, and I obtained that genes are over and less expressed with Limma.

The problem is that I don't know how can continue for get the GO and KEGG. Any help?

Thank you very much, Santi.

ADD COMMENTlink written 2.2 years ago by santi.cabellos0
1

The more information you provide, the better the chance that someone can help. You don't give much detail about what you have tried and what your end analysis goals are.

If you're trying to find a Bioconductor package appropriate for pathway analysis you  can use the biocViews interface:

http://www.bioconductor.org/packages/release/BiocViews.html#___Pathways

This post from Gordon talks about pathway analysis in general, and may be useful background.

Packages for GO and KEGG analysis on RNAseq data

Valerie

 

ADD REPLYlink written 2.2 years ago by Valerie Obenchain ♦♦ 6.4k
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