Merging paired end Illumina reads in R
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@jpleonard2000-8886
Last seen 6.1 years ago

Are there any functions in the bioconductor packages that merge Illumina paired end reads, similar to FLASH or PEAR? I assumed this would be a function in ShortReads but couldn't find anything about this in the documentation. Thanks.

merge • 1.0k views
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@martin-morgan-1513
Last seen 3 months ago
United States

This is not possible in ShortRead; I do not know of an implementation in Bioconductor.

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