I am trying to compare the q.values produced by a dataset from a normalization done by SCAN against the q.values from the same dataset but from a meta-analyses. I want the comparison to be in the form of a scatter plot. I want this plot to show that there is a correlation between the q.values of the different methods. However, SCAN produces very small q.values like: 1.82243620956903E-10 and 0.00150430678492128 and the meta-analyses q.values are quite large: 23.36 and 56.58.
Is there a way I can make a scatter plot to show a correlation between the SCAN q.values and the meta-analyses q.values for the same dataset?