How to convert probe sets to Gene symbols ?
1
0
Entering edit mode
gtrdy20 • 0
@gtrdy20-9293
Last seen 8.3 years ago

Hi everyone,

I 'm totally new to R. I work on Affymetrix platform GPL570, hgu 133 plus 2 array.

Anyone could please guide me how to convert probe IDs to Gene Symbols as input data of affylmGUI ?

Cheers,

affylmgui affymetrix microarrays hgu133plus2 • 2.1k views
ADD COMMENT
0
Entering edit mode
b.nota ▴ 360
@bnota-7379
Last seen 3.5 years ago
Netherlands

You can use biomaRt from bioconductor. In the manual they describe how to convert between different IDs. Good luck!

ADD COMMENT
0
Entering edit mode

Thanks, I'll try it !

 

ADD REPLY

Login before adding your answer.

Traffic: 698 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6