Closed:How to search overlapped peak regions in parallel for multiple bed file in R?
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@jurat-shahidin-9488
Last seen 4.0 years ago
Chicago, IL, USA

I want to process more than two bed files, goal is to search overlapped peak regions in parallel for multiple bed files. When taking single genomic interval as query input, I am gonna ask what's the overlapped regions from second bed files and third bed files with respect to selected single interval from first bed files. It means I am gonna search overlapped regions in parallel for every single interval as query input ? Is there any good way to solve that ? how can I iterate over all peak interval from fist bed files, second bed files and so on.  Thank you !!

[R] findoverlaps parallel searching GRanges • 390 views
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