coefmap plot - label colors
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thrabe • 0
@thrabe-9205
Last seen 8.3 years ago
United States

I am using the coefmap plot to display NMF based classification of my data. When I add the sample labels to the plot, it will highlight a colored bar under the classification tree to indicate where data came from. The default colors are difficult to distinguish in presentations (blue, dark purple, light purple). Is there a way to select another color list for the sample labels than the default one? I see there's annColors, but I do not get what parameter type it really is. 

 

affy coefmap nmf • 1.1k views
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@james-w-macdonald-5106
Last seen 6 hours ago
United States

NMF isn't a Bioconductor package. It doesn't appear to be a CRAN package either, being hosted on RForge. So if you have questions, you should email the author/maintainer directly.

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Ok, I'll divert my questions to other resources then. Thought to be able to reach experienced users here.

 

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