Question: Methylpipe function pool.reads gives syntax error
0
gravatar for pirona
3.5 years ago by
pirona0
pirona0 wrote:

I have a problem with the pool.reads function

 

When I try to pool data output from the meth.call function I obtain the subsequent error:

 

File "path/to/sample_merge.txt", line 1

        chr20           8179      +             CG          2             4

                       ^

SyntaxError: invalid syntax

 

I used both my personal data and the H1_chr20_CG_10k.txt data (creating a copy to have two files) in the extdata folder of the methylPipe package.

Any suggestion?

methylpipe • 404 views
ADD COMMENTlink written 3.5 years ago by pirona0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 101 users visited in the last hour