I am using the minfi devel version 1.17.6 because it has been updated to support the new MethylationEPIC. I downloaded
from https://bitbucket.org/hansenlab/illumina_epic. I am trying to process MethylationEPIC arrays. The
read.metharray.exp() function works. However, many downstream functions like
getBeta() give me an error:
Error in packageVersion("IlluminaHumanMethylation450kmanifest") : package ‘IlluminaHumanMethylation450kmanifest’ not found
Is that a problem that it's asking for the wrong manifest? Should I just install and use that library?