Minfi: estimateCellCounts rgSet
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cardenasca ▴ 40
@cardenasca-9929
Last seen 3.4 years ago

Hello,

I would like to use the estimateCellCounts function without having to input an rgSet object (i.e. I only have access to betas and the genomic ratio set).

Is there a way to back transform to an rgSet from the process betas or the genomic ratio set so I can use the function with the available data?

Thanks!

 

 

minfi 450k flowsorted.blood.450k • 1.0k views
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Habil Zare ▴ 170
@habil-zare-7836
Last seen 5 weeks ago
United States/Austin Area

See A: An alternative to estimateCellCounts function.

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