OpenCyto -- time gate and border events
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@ulrik-stervbo-1723
Last seen 5.5 years ago
Germany

Hello everyone,

does anyone know if and how I can remove border events in all channels without specifying each channel in the template?

Also, I would like to have a time gate, is this possible? I know i can do both with flowcore, but I also like the idea of a readable template, and would hate to mix the to approaches.

Thanks

Ulrik

opencyto gating flowcore flow cytometry • 606 views
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Jiang, Mike ★ 1.3k
@jiang-mike-4886
Last seen 20 days ago
(Private Address)

openCyto mainly expects the gating method that generates theĀ geometrical shapes (i.e.. rectangle, ellipse, polygon). And these two types of gate are not conventional and can not be used directly.

However openCyto do support the `gated` results to be added to the gating tree as a special `logicalGate`. That is to say, as long as the function returns a `logicalFilterResult`, it can be used in the gating template.

So you can simply create the wrapper functions for these two gating methods so that they conform to the conventions of the framework

Here is the example: http://rpubs.com/wjiang2/177022

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