RNA-Seq metagene coverage
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Jake ▴ 90
@jake-7236
Last seen 19 months ago
United States

Hi,

I'd like to calculate RNA-Seq meta read coverage over different subsets of genes similar to the genebody coverage function in RSeQC (http://rseqc.sourceforge.net/#genebody-coverage-py). I saw a number of packages that will do this for genomic coordinates, but I'm looking for something that will take into account just exons when scaling the region. Are there any R packages that will do this?

Thanks

coverage • 1.3k views
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