How extract F.p.value and lods values from a eBayes object in limma???
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@marcelo-luiz-de-laia-377
Last seen 9.6 years ago
Hi, I do the commands: todos20050401.fit3 <- eBayes(todos20050401.fit2) selected <- p.adjust(todos20050401.fit3$F.p.value,method="fdr")<0.05 selected.result <- todos20050401.fit3$genes[selected,] write.table(selected.result,"selected.F.p.value0.05.csv",sep=",") In my cvs file I get the name of genes, but I don t get the "F.p.value" nor "lods" values. I try: todos20050401.fit3$genes[selected,],todos20050401.fit3$F.p.value,todos 20050401.fit3$lods Error: syntax error I read about cbind, but I don t obtain success, too. Please, Anyone point me if is possible todo? Thanks Marcelo
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