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Question: Question on Gage
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gravatar for rl1385
2.5 years ago by
rl13850
rl13850 wrote:

Dear All:

I am running an RNA-Seq analysis and is currently using Gage. I have raw data from an RNA-Seq and have used edgeR from the manual. I have followed all of the tutorial steps in the Gage manual that is associated with EdgeR. However when I have gotten to the steps for path.ids I have noticed that in R it reads as character (empty). I was wondering if anyone knows on why this might happen?

Sincerely,

Ron

rna-seq gage package path.ids • 317 views
ADD COMMENTlink written 2.5 years ago by rl13850

You're going to have to a minimal reproducible example (with code) that produces the error -- and the output of the error -- for someone to really able to help you.

 

ADD REPLYlink written 2.5 years ago by Steve Lianoglou12k
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