0
3.1 years ago by
michel.moser0 wrote:

Dear bioconductors,

I would like to install DESeq2 but get stuck with an Error that it cant find the corresponding tar for the required biocparallel package.

Could someone fix the link to this file? Or am i doing something wrong?

Error:

> biocLite("DESeq2")


trying URL 'https://bioconductor.org/packages/3.3/bioc/src/contrib/DESeq2_1.12.3.tar.gz'
Content type 'unknown' length 1324782 bytes (1.3 MB)
==================================================

ERROR: dependency ‘BiocParallel’ is not available for package ‘DESeq2’

biocparallel • 494 views
modified 3.1 years ago by Martin Morgan ♦♦ 23k • written 3.1 years ago by michel.moser0
0
3.1 years ago by
Martin Morgan ♦♦ 23k
United States
Martin Morgan ♦♦ 23k wrote:

Can you simply 'try again' in a new R session

BiocInstaller::biocLite("BiocParallel")

The version number in the url -- 1.6.3 -- is different from the version number available -- 1.6.4. Somewhere, the file that tells R what packages are available is out-of-date with the packages that are actually available.