I am trying to use the function SAMseq from samr package to analyse the gene expression of my matrix but I get this error message.
> sam_test = SAMseq(RNA_seq_DNAm, vector_DNAm, resp.type = "Quantitative", genenames = names) Estimating sequencing depths... Resampling to get new data matrices... Error in rankcol(t(xresamp[, , k])) : NA/NaN/Inf in foreign function call (arg 1) In addition: There were 20 warnings (use warnings() to see them) Error during wrapup: cannot open the connection
Can someone help me understand what it means? This is a school project I am working on.
Thanks in advance!