Error in SAMseq analysis with R
0
0
Entering edit mode
namilio • 0
@namilio-11363
Last seen 5.7 years ago

I am trying to use the function SAMseq from samr package to analyse the gene expression of my matrix but I get this error message.

> sam_test = SAMseq(RNA_seq_DNAm, vector_DNAm, resp.type = "Quantitative",
genenames = names)

Estimating sequencing depths...
Resampling to get new data matrices...
Error in rankcol(t(xresamp[, , k])) :
NA/NaN/Inf in foreign function call (arg 1)
In addition: There were 20 warnings (use warnings() to see them)
Error during wrapup: cannot open the connection

Can someone help me understand what it means? This is a school project I am working on.

r samseq microarray rnaseq geneexpression • 759 views