Cho et al.'s Expression Dataset in Yeast
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Ho-Joon Lee ▴ 20
@ho-joon-lee-1219
Last seen 9.6 years ago
Dear All, I would like to ask about the following yeast cell cycle dataset, http://yscdp.stanford.edu/yeast_cell_cycle/full_data.html which was published in Molecular Cell in 1998 by Cho et al. Is there a BioC package for the dataset like Spellman et al.'s one(yeastCC)? I would like to get some help to understand that kind of data matrix because I am familiar only with log2-ratio data matrices. Or has anybody got an experience of analyzing the dataset? I am interested in comparing Cho's dataset with Spellman's and combine the two into one matrix if possible at all. Thank you in advance. Best wishes, Lee
Yeast cycle Yeast cycle • 1.0k views
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xpeng ▴ 60
@xpeng-1210
Last seen 9.6 years ago
Hi, The following website provides a combined data file in tab-delimited format: http://genome-www.stanford.edu/cellcycle/data/rawdata/ Best, Xinxia >===== Original Message From Ho-Joon Lee <lee@molgen.mpg.de> ===== >Dear All, > >I would like to ask about the following yeast cell cycle dataset, > >http://yscdp.stanford.edu/yeast_cell_cycle/full_data.html > >which was published in Molecular Cell in 1998 by Cho et al. > >Is there a BioC package for the dataset like Spellman et al.'s >one(yeastCC)? > >I would like to get some help to understand that kind of data matrix >because I am familiar only with log2-ratio data matrices. >Or has anybody got an experience of analyzing the dataset? >I am interested in comparing Cho's dataset with Spellman's and combine >the two into one matrix if possible at all. > >Thank you in advance. > >Best wishes, > >Lee > >_______________________________________________ >Bioconductor mailing list >Bioconductor@stat.math.ethz.ch >https://stat.ethz.ch/mailman/listinfo/bioconductor
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