quality control analysis
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lily ▴ 20
@lily-11438
Last seen 2.8 years ago
India

Hi

I am getting error when i run my data for quality control through arrayQualityMetrics. Not able to detect my error.

Error in gridsvg(name = "Report/pca.svg", width = 5.57480157480236, height = 5.57480157480236,  : 
  Only one 'gridsvg' device may be used at a time.

 

Please help

arrayqualitymetrics • 1.2k views
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@james-w-macdonald-5106
Last seen 1 hour ago
United States

You might try restarting R, or doing dev.off() until you get to

> dev.off()
null device
          1

at which point you should have closed all opened gridsvg devices, and should be able to proceed.

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thanks for the reply

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hi 

I tried. Again getting different error.

The directory 'reportnormalized' has been created.
Error in file.info(x) : invalid filename argument
In addition: Warning message:
closing unused connection 3 (report_normalized/index.html) 

But i am getting some results in output file. (hm, out hm, index) and the results are incomplete

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What versions of R/BioC are you using? If not the current version of both, you need to upgrade.

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I am using the latest version R.3.3.1

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